ENSDARG00000008395


Danio rerio

Features
Gene ID: ENSDARG00000008395
  
Biological name :snupn
  
Synonyms : snupn / snurportin 1
  
Possible biological names infered from orthology : O95149 / Q80W37
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 6432578
Gene end: 6448050
  
Corresponding Affymetrix probe sets: Dr.3168.2.A1_a_at (Zebrafish Array)   NM_199694_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000016305
Ensembl peptide - ENSDARP00000156718
NCBI entrez gene - 324743     See in Manteia.
RefSeq - NM_199694
RefSeq Peptide - NP_955988
swissprot - Q6P5J9
ZFIN ID - ZDB-GENE-030131-3464
Ensembl - ENSDARG00000008395
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SNUPNENSGALG00000029537Gallus gallus
 SNUPNENSG00000169371Homo sapiens
 SnupnENSMUSG00000055334Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002652  Importin-alpha, importin-beta-binding domain
 IPR017336  Snurportin-1
 IPR024721  Snurportin-1, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006606 protein import into nucleus IEA
 biological_processGO:0061015 snRNA import into nucleus IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008565 protein transporter activity IEA
 molecular_functionGO:0061608 nuclear import signal receptor activity IEA


Pathways (from Reactome)
Pathway description
snRNP Assembly


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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