ENSDARG00000008953


Danio rerio

Features
Gene ID: ENSDARG00000008953
  
Biological name :pofut1
  
Synonyms : pofut1 / protein O-fucosyltransferase 1
  
Possible biological names infered from orthology : Q91ZW2 / Q9H488
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 7692042
Gene end: 7709134
  
Corresponding Affymetrix probe sets: Dr.15162.1.A1_a_at (Zebrafish Array)   Dr.15162.2.S1_at (Zebrafish Array)   Dr.15162.3.A1_a_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000008366
NCBI entrez gene - 403029     See in Manteia.
swissprot - F1R676
ZFIN ID - ZDB-GENE-040303-2
Ensembl - ENSDARG00000008953
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 POFUT1ENSGALG00000006594Gallus gallus
 POFUT1ENSG00000101346Homo sapiens
 Pofut1ENSMUSG00000046020Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019378  GDP-fucose protein O-fucosyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006004 fucose metabolic process IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000453 cranial nerve X cranial nerve X position , abnormal
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 ZFA:0001058 caudal fin caudal fin decreased pigmentation , abnormal
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 ZFA:0001094 whole organism whole organism axis decreased pigmentation , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr