ENSDARG00000009273


Danio rerio

Features
Gene ID: ENSDARG00000009273
  
Biological name :ppm1da
  
Synonyms : ppm1da / protein phosphatase, Mg2+/Mn2+ dependent, 1Da
  
Possible biological names infered from orthology : O15297 / PPM1D / Protein phosphatase 1D / protein phosphatase, Mg2+/Mn2+ dependent 1D / Q9QZ67
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 26933196
Gene end: 26939404
  
Corresponding Affymetrix probe sets: Dr.24198.1.S1_at (Zebrafish Array)   Dr.24198.1.S2_at (Zebrafish Array)   NM_201090_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000018669
NCBI entrez gene - 394065     See in Manteia.
RefSeq - NM_201090
RefSeq Peptide - NP_957384
swissprot - Q6NYW2
ZFIN ID - ZDB-GENE-040426-815
Ensembl - ENSDARG00000009273
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PPM1DENSGALG00000035610Gallus gallus
 PPM1DENSG00000170836Homo sapiens
 Ppm1dENSMUSG00000020525Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ppm1db / protein phosphatase, Mg2+/Mn2+ dependent, 1Db / PPM1D* / Q9QZ67* / O15297* / Protein phosphatase 1D * / protein phosphatase, Mg2+/Mn2+ dependent 1D*ENSDARG0000002138048
ppm1g / protein phosphatase, Mg2+/Mn2+ dependent, 1G / O15355* / Q61074* / Protein phosphatase 1G *ENSDARG0000007555914


Protein motifs (from Interpro)
Interpro ID Name
 IPR000222  PPM-type phosphatase, divalent cation binding
 IPR001932  PPM-type phosphatase domain
 IPR015655  Protein phosphatase 2C family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IEA
 molecular_functionGO:0004722 protein serine/threonine phosphatase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0043169 cation binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Transcriptional regulation by RUNX2


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000040261 runx2a / runt-related transcription factor 2a / RUNX2* / Q08775* / Q13950* / runt related transcription factor 2*  / reaction






 

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