ENSDARG00000009472


Danio rerio

Features
Gene ID: ENSDARG00000009472
  
Biological name :med19b
  
Synonyms : med19b / mediator complex subunit 19b / Q6DRL8
  
Possible biological names infered from orthology : A0JLT2 / MED19 / mediator complex subunit 19 / Mediator of RNA polymerase II transcription subunit 19 / Q8C1S0
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 44582369
Gene end: 44591489
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000116331
Ensembl peptide - ENSDARP00000016407
NCBI entrez gene - 445021     See in Manteia.
RefSeq - NM_001003416
RefSeq Peptide - NP_001003416
swissprot - B8A5B3
swissprot - Q6DRL8
ZFIN ID - ZDB-GENE-040727-4
Ensembl - ENSDARG00000009472
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MED19ENSGALG00000007341Gallus gallus
 MED19ENSG00000156603Homo sapiens
 Med19ENSMUSG00000027080Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
med19a / Q08C81 / mediator complex subunit 19a / MED19* / A0JLT2* / Q8C1S0* / mediator complex subunit 19* / Mediator of RNA polymerase II transcription subunit 19 *ENSDARG0000003739271


Protein motifs (from Interpro)
Interpro ID Name
 IPR019403  Mediator complex, subunit Med19, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016592 mediator complex IBA
 molecular_functionGO:0008134 transcription factor binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain necrotic , abnormal
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 ZFA:0000012 central nervous system central nervous system necrotic , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000112 gut gut quality , abnormal
gut hypoplastic , abnormal
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 ZFA:0000114 heart heart quality , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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