ENSDARG00000010596


Danio rerio

Features
Gene ID: ENSDARG00000010596
  
Biological name :slc7a6os
  
Synonyms : slc7a6os / solute carrier family 7, member 6 opposite strand
  
Possible biological names infered from orthology : Probable RNA polymerase II nuclear localization protein SLC7A6OS / Q7TPE5 / Q96CW6
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 28612671
Gene end: 28623292
  
Corresponding Affymetrix probe sets: Dr.12894.1.A1_at (Zebrafish Array)   NM_001007344_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000020840
Ensembl peptide - ENSDARP00000141048
NCBI entrez gene - 492472     See in Manteia.
RefSeq - NM_001007344
RefSeq Peptide - NP_001007345
swissprot - F1QEZ3
swissprot - A0A0R4IY73
ZFIN ID - ZDB-GENE-041114-32
Ensembl - ENSDARG00000010596
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC7A6OSENSGALG00000035575Gallus gallus
 Q96CW6ENSG00000103061Homo sapiens
 Q7TPE5ENSMUSG00000033106Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013883  Transcription factor Iwr1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000012 central nervous system central nervous system malformed , abnormal
Show

 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary amorphous , abnormal
midbrain hindbrain boundary decreased amount , abnormal
midbrain hindbrain boundary disorganized , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000079 telencephalon telencephalon decreased amount , abnormal
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 ZFA:0000088 YSL YSL edematous , abnormal
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 ZFA:0000101 diencephalon diencephalon dorsal region decreased amount , abnormal
diencephalon disorganized , abnormal
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 ZFA:0000155 somite somite morphology , abnormal
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 ZFA:0000160 tegmentum tegmentum disorganized , abnormal
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 ZFA:0000588 statoacoustic (VIII) ganglion statoacoustic (VIII) ganglion decreased amount , abnormal
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 ZFA:0001094 whole organism whole organism immobile , abnormal
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 ZFA:0001314 posterior lateral line ganglion posterior lateral line ganglion absent , abnormal
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 ZFA:0001391 anterior lateral line ganglion anterior lateral line ganglion absent , abnormal
Show

 ZFA:0009365 interneuromast cell interneuromast cell spatial pattern , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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