ENSDARG00000010721


Danio rerio

Features
Gene ID: ENSDARG00000010721
  
Biological name :sept6
  
Synonyms : sept6 / septin 6
  
Possible biological names infered from orthology : Q14141 / Q9R1T4
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 33297781
Gene end: 33328031
  
Corresponding Affymetrix probe sets: Dr.26136.1.A1_at (Zebrafish Array)   Dr.3891.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000121708
Ensembl peptide - ENSDARP00000142431
Ensembl peptide - ENSDARP00000142358
Ensembl peptide - ENSDARP00000117104
NCBI entrez gene - 322694     See in Manteia.
swissprot - A0A140LGQ2
swissprot - A0A140LGH9
swissprot - F1QQ74
swissprot - F1R3Q3
ZFIN ID - ZDB-GENE-030131-1414
Ensembl - ENSDARG00000010721
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SEPT6ENSGALG00000008633Gallus gallus
 SEPT6ENSG00000125354Homo sapiens
 Sept6ENSMUSG00000050379Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sept10 / septin 10 / Q9P0V9* / Q6ZU15* / SEPT14* / septin 14*ENSDARG0000009923675
sept8a / septin 8aENSDARG0000003260675
sept8b / septin 8bENSDARG0000001423373
CR352223.1ENSDARG0000011254719


Protein motifs (from Interpro)
Interpro ID Name
 IPR016491  Septin
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030379  Septin-type guanine nucleotide-binding (G) domain
 IPR030644  Septin 6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003140 determination of left/right asymmetry in lateral mesoderm IMP
 biological_processGO:0007368 determination of left/right symmetry IMP
 biological_processGO:0035469 determination of pancreatic left/right asymmetry IMP
 biological_processGO:0060271 cilium assembly IMP
 biological_processGO:0061371 determination of heart left/right asymmetry IMP
 biological_processGO:0071907 determination of digestive tract left/right asymmetry IMP
 biological_processGO:0071910 determination of liver left/right asymmetry IMP
 cellular_componentGO:0005929 cilium IDA
 cellular_componentGO:0031105 septin complex IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000001 Kupffer s vesicle Kupffers vesicle has fewer parts of type Kupffers vesicle cilium, abnormal
Kupffers vesicle cilium decreased length , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000150 pronephric duct pronephric duct dilated , abnormal
pronephric duct has fewer parts of type pronephric duct cilium, abnormal
Show

 ZFA:0000151 pronephros pronephros cystic , abnormal
Show

 ZFA:0001094 whole organism whole organism curved , abnormal
Show

 ZFA:0001135 neural tube neural tube cilium assembly process quality , abnormal
Show

 ZFA:0001558 pronephric tubule pronephric tubule dilated , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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