ENSDARG00000012390


Danio rerio

Features
Gene ID: ENSDARG00000012390
  
Biological name :kcnk5b
  
Synonyms : kcnk5b / potassium channel, subfamily K, member 5b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 9223514
Gene end: 9239037
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000015031
NCBI entrez gene - 393606     See in Manteia.
RefSeq - NM_200633
RefSeq Peptide - NP_956927
swissprot - Q5RGB0
ZFIN ID - ZDB-GENE-040426-1297
Ensembl - ENSDARG00000012390
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
kcnk5a / potassium channel, subfamily K, member 5a / KCNK5* / O95279* / potassium two pore domain channel subfamily K member 5*ENSDARG0000002358750
kcnk10b / potassium channel, subfamily K, member 10b / P57789* / KCNK10* / potassium channel, subfamily K, member 10* / potassium two pore domain channel subfamily K member 10*ENSDARG0000004595623
kcnk10a / potassium channel, subfamily K, member 10a / P57789* / KCNK10* / potassium channel, subfamily K, member 10* / potassium two pore domain channel subfamily K member 10*ENSDARG0000006284923
kcnk4a / potassium channel, subfamily K, member 4a / KCNK4* / Q9NYG8* / O88454* / Potassium channel subfamily K member 4 * / potassium two pore domain channel subfamily K member 4*ENSDARG0000010328621
kcnk2a / potassium channel, subfamily K, member 2a / KCNK2* / O95069* / P97438* / potassium two pore domain channel subfamily K member 2* / Mus musculus potassium channel, subfamily K, memb...ENSDARG0000005512320
kcnk2b / potassium channel, subfamily K, member 2b / KCNK2* / O95069* / P97438* / potassium two pore domain channel subfamily K member 2* / Mus musculus potassium channel, subfamily K, memb...ENSDARG0000000715120
kcnk15 / potassium channel, subfamily K, member 15 / Q9H427* / potassium two pore domain channel subfamily K member 15*ENSDARG0000007737119
kcnk3b / potassium channel, subfamily K, member 3b / KCNK3* / O35111* / O14649* / Potassium channel subfamily K member 3 * / potassium two pore domain channel subfamily K member 3*ENSDARG0000005289818
kcnk3a / potassium channel, subfamily K, member 3a / KCNK3* / O35111* / O14649* / Potassium channel subfamily K member 3 * / potassium two pore domain channel subfamily K member 3*ENSDARG0000004346618
kcnk9 / potassium channel, subfamily K, member 9 / Q3LS21* / Q9NPC2* / potassium two pore domain channel subfamily K member 9*ENSDARG0000010456318
kcnk1a / potassium channel, subfamily K, member 1a / KCNK1* / O08581* / O00180* / Potassium channel subfamily K member 1 * / potassium two pore domain channel subfamily K member 1*ENSDARG0000004506717
kcnk17 / potassium channel, subfamily K, member 17 / Q96T54* / potassium two pore domain channel subfamily K member 17*ENSDARG0000010545317
kcnk1b / potassium channel, subfamily K, member 1b / KCNK1* / O08581* / O00180* / Potassium channel subfamily K member 1 * / potassium two pore domain channel subfamily K member 1*ENSDARG0000001725417
kcnk6 / potassium channel, subfamily K, member 6 / Q9Y257* / potassium two pore domain channel subfamily K member 6* / potassium inwardly-rectifying channel, subfamily K, member 6*ENSDARG0000000738316
kcnk7 / potassium channel, subfamily K, member 7 / Q9Y2U2* / potassium two pore domain channel subfamily K member 7*ENSDARG0000005733115


Protein motifs (from Interpro)
Interpro ID Name
 IPR003092  Two pore domain potassium channel, TASK family
 IPR003280  Two pore domain potassium channel
 IPR013099  Potassium channel domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0030322 stabilization of membrane potential IBA
 biological_processGO:0033333 fin development IMP
 biological_processGO:0033334 fin morphogenesis IMP
 biological_processGO:0042391 regulation of membrane potential IDA
 biological_processGO:0071805 potassium ion transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005267 potassium channel activity IEA
 molecular_functionGO:0015271 outward rectifier potassium channel activity IDA
 molecular_functionGO:0022841 potassium ion leak channel activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000108 fin fin joint irregular spatial pattern , abnormal
fin increased size , abnormal
fin increased length , abnormal
fin quality , abnormal
fin decreased length , abnormal
Show

 ZFA:0000292 surface structure surface structure quality , abnormal
Show

 ZFA:0000622 barbel barbel increased size , abnormal
Show

 ZFA:0001058 caudal fin caudal fin developmental growth increased rate , abnormal
caudal fin asymmetrical , abnormal
caudal fin drooping , abnormal
caudal fin increased length , abnormal
Show

 ZFA:0001094 whole organism whole organism shape , abnormal
Show

 ZFA:0001117 post-vent region post-vent region quality , abnormal
Show

 ZFA:0001161 pectoral fin pectoral fin increased length , abnormal
Show

 ZFA:0001162 anal fin anal fin increased length , abnormal
Show

 ZFA:0001173 dorsal fin dorsal fin increased length , abnormal
Show

 ZFA:0001184 pelvic fin pelvic fin increased length , abnormal
Show

 ZFA:0001189 vertebra vertebra chordoma present , abnormal
Show

 ZFA:0001269 regenerating fin regenerating fin increased amount , abnormal
regenerating fin actinotrichium morphology , abnormal
regenerating fin actinotrichium decreased size , abnormal
Show

 ZFA:0001554 lepidotrichium lepidotrichium increased length , abnormal
lepidotrichium increased branchiness , abnormal
lepidotrichium structure , abnormal
Show

 ZFA:0005633 lepidotrichium segment lepidotrichium segment increased length , abnormal
lepidotrichium segment length , abnormal
lepidotrichium segment increased amount , abnormal
lepidotrichium segment increased variability of size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr