ENSDARG00000012591


Danio rerio

Features
Gene ID: ENSDARG00000012591
  
Biological name :pdcd10b
  
Synonyms : pdcd10b / programmed cell death 10b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 36721357
Gene end: 36731963
  
Corresponding Affymetrix probe sets: Dr.16820.1.S1_at (Zebrafish Array)   NM_212933_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000021450
NCBI entrez gene - 405869     See in Manteia.
RefSeq - NM_212933
RefSeq Peptide - NP_998098
swissprot - B8JJS6
ZFIN ID - ZDB-GENE-040426-2607
Ensembl - ENSDARG00000012591
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6PHH3 / pdcd10a / programmed cell death 10aENSDARG0000003505492
CT027583.1 / PDCD10* / Q9BUL8* / programmed cell death 10*ENSDARG0000011195217


Protein motifs (from Interpro)
Interpro ID Name
 IPR009652  Programmed cell death protein 10
 IPR029048  Heat shock protein 70kD, C-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000084 yolk yolk ventral region edematous , abnormal
Show

 ZFA:0000099 brain vasculature brain vasculature dilated , abnormal
brain vasculature morphology , abnormal
Show

 ZFA:0000114 heart heart dilated , abnormal
heart shape , abnormal
heart malformed , abnormal
Show

 ZFA:0000180 caudal vein caudal vein dilated , abnormal
Show

 ZFA:0000477 posterior cardinal vein posterior cardinal vein dilated , abnormal
Show

 ZFA:0000604 ventral aorta ventral aorta decreased thickness , abnormal
ventral aorta obstructed , abnormal
Show

 ZFA:0001067 anterior cerebral vein anterior cerebral vein increased thickness , abnormal
anterior cerebral vein dilated , abnormal
Show

 ZFA:0001094 whole organism whole organism dead , abnormal
Show

 ZFA:0001267 cranial vasculature cranial vasculature dilated , abnormal
cranial vasculature spatial pattern , abnormal
cranial vasculature attachment quality cranial vasculature , abnormal
cranial vasculature blood vessel endothelial cell disorganized , abnormal
Show

 ZFA:0001285 intersegmental vessel intersegmental vessel increased width , abnormal
Show

 ZFA:0001319 myocardium myocardium decreased thickness , abnormal
Show

 ZFA:0005005 aortic arch 1 aortic arch 1 decreased thickness , abnormal
aortic arch 1 obstructed , abnormal
Show

 ZFA:0005010 mid cerebral vein mid cerebral vein increased size , abnormal
Show

 ZFA:0005017 primordial midbrain channel primordial midbrain channel increased size , abnormal
Show

 ZFA:0005020 central artery central artery hypoplastic , abnormal
Show

 ZFA:0005025 dorsal longitudinal anastomotic vessel dorsal longitudinal anastomotic vessel increased width , abnormal
Show

 ZFA:0005035 subintestinal vein subintestinal vein branched , abnormal
subintestinal vein disorganized , abnormal
Show

 ZFA:0005049 prosencephalic artery prosencephalic artery increased thickness , abnormal
prosencephalic artery dilated , abnormal
Show

 ZFA:0005092 mesencephalic vein mesencephalic vein dilated , abnormal
mesencephalic vein increased thickness , abnormal
mesencephalic vein unlumenized , abnormal
mesencephalic vein spatial pattern , abnormal
Show

 ZFA:0009036 blood vessel endothelial cell blood vessel endothelial cell cell projection increased amount , abnormal
blood vessel endothelial cell cell projection increased length , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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