ENSDARG00000013443


Danio rerio

Features
Gene ID: ENSDARG00000013443
  
Biological name :atp6v1ba
  
Synonyms : atp6v1ba / ATPase, H+ transporting, lysosomal, V1 subunit B, member a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 21372291
Gene end: 21418340
  
Corresponding Affymetrix probe sets: Dr.186.1.S1_at (Zebrafish Array)   NM_182878_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000008834
NCBI entrez gene - 359839     See in Manteia.
RefSeq - NM_182878
RefSeq Peptide - NP_878298
swissprot - Q6PC68
ZFIN ID - ZDB-GENE-030711-3
Ensembl - ENSDARG00000013443
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atp6v1b2 / ATPase H+ transporting V1 subunit B2 / P21281* / P62814* / V-type proton ATPase subunit B, brain isoform *ENSDARG0000004346590


Protein motifs (from Interpro)
Interpro ID Name
 IPR000194  ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
 IPR004100  ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
 IPR005723  ATPase, V1 complex, subunit B
 IPR020003  ATPase, alpha/beta subunit, nucleotide-binding domain, active site
 IPR022879  V-type ATP synthase regulatory subunit B/beta
 IPR024034  ATPase, F1/V1 complex, beta/alpha subunit, C-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015991 ATP hydrolysis coupled proton transport IEA
 biological_processGO:0046034 ATP metabolic process IEA
 cellular_componentGO:0033180 proton-transporting V-type ATPase, V1 domain IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr