ENSDARG00000014083


Danio rerio

Features
Gene ID: ENSDARG00000014083
  
Biological name :wdr82
  
Synonyms : Q6NV31 / wdr82 / WD repeat domain 82
  
Possible biological names infered from orthology : Q6UXN9 / Q8BFQ4 / WD repeat domain containing 82
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 41452979
Gene end: 41461390
  
Corresponding Affymetrix probe sets: Dr.4587.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000019685
NCBI entrez gene - 321614     See in Manteia.
swissprot - Q6NV31
ZFIN ID - ZDB-GENE-030131-333
Ensembl - ENSDARG00000014083
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WDR82ENSGALG00000025904Gallus gallus
 WDR82ENSG00000164091Homo sapiens
 Wdr82ENSMUSG00000020257Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0080182 histone H3-K4 trimethylation IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0048188 Set1C/COMPASS complex IEA
 cellular_componentGO:0072357 PTW/PP1 phosphatase complex IEA
 molecular_functionGO:0003682 chromatin binding IBA
 molecular_functionGO:0042800 histone methyltransferase activity (H3-K4 specific) IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000095 pharyngeal arch 3-7 skeleton pharyngeal arch 3-7 skeleton quality , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000112 gut gut hypoplastic , abnormal
gut quality , abnormal
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 ZFA:0000672 hyomandibula hyomandibula decreased size , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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 ZFA:0001439 anatomical system anatomical system quality , abnormal
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 ZFA:0001611 pharyngeal arch 2 pharyngeal arch 2 decreased size , abnormal
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 ZFA:0001612 pharyngeal arch 1 pharyngeal arch 1 decreased size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr