ENSDARG00000014313


Danio rerio

Features
Gene ID: ENSDARG00000014313
  
Biological name :atp5pf
  
Synonyms : atp5pf / ATP synthase peripheral stalk subunit F6
  
Possible biological names infered from orthology : Atp5j / ATP synthase-coupling factor 6, mitochondrial / P18859 / P97450
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 610082
Gene end: 614638
  
Corresponding Affymetrix probe sets: Dr.632.1.S1_at (Zebrafish Array)   NM_213307_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000114450
Ensembl peptide - ENSDARP00000123205
Ensembl peptide - ENSDARP00000005644
Ensembl peptide - ENSDARP00000113309
NCBI entrez gene - 406599     See in Manteia.
RefSeq - NM_213307
RefSeq - XM_017352984
RefSeq Peptide - NP_998472
swissprot - B8JM34
swissprot - Q6NYF7
ZFIN ID - ZDB-GENE-040426-2534
Ensembl - ENSDARG00000014313
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATP5PFENSGALG00000015751Gallus gallus
 ATP5PFENSG00000154723Homo sapiens
 Atp5jENSMUSG00000022890Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-140m22.7 / Atp5j* / ATP5PF* / P18859* / P97450* / ATP synthase peripheral stalk subunit F6* / ATP synthase-coupling factor 6, mitochondrial *ENSDARG0000007796748
si:dkey-22n8.3 / Atp5j* / ATP5PF* / P18859* / P97450* / ATP synthase peripheral stalk subunit F6* / ATP synthase-coupling factor 6, mitochondrial *ENSDARG0000008985341


Protein motifs (from Interpro)
Interpro ID Name
 IPR008387  ATP synthase-coupling factor 6, mitochondrial


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0015986 ATP synthesis coupled proton transport IEA
 cellular_componentGO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0015078 proton transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Formation of ATP by chemiosmotic coupling
Cristae formation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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