ENSDARG00000015314


Danio rerio

Features
Gene ID: ENSDARG00000015314
  
Biological name :zc4h2
  
Synonyms : Q7T3I0 / zc4h2 / zinc finger, C4H2 domain containing
  
Possible biological names infered from orthology : Q68FG0 / Q9NQZ6 / zinc finger C4H2-type containing
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 22073710
Gene end: 22082918
  
Corresponding Affymetrix probe sets: Dr.10804.1.S1_at (Zebrafish Array)   NM_199642_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000010952
NCBI entrez gene - 323487     See in Manteia.
RefSeq - NM_199642
RefSeq Peptide - NP_955936
swissprot - Q7T3I0
ZFIN ID - ZDB-GENE-030131-2207
Ensembl - ENSDARG00000015314
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZC4H2ENSGALG00000042725Gallus gallus
 ZC4H2ENSG00000126970Homo sapiens
 Zc4h2ENSMUSG00000035062Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR018482  Zinc finger, C4H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007399 nervous system development IMP
 biological_processGO:0007528 neuromuscular junction development IMP
 biological_processGO:0021522 spinal cord motor neuron differentiation IMP
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0045666 positive regulation of neuron differentiation IMP
 biological_processGO:0048665 neuron fate specification IMP
 biological_processGO:0048666 neuron development IMP
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0045211 postsynaptic membrane ISS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000075 spinal cord spinal cord motor neuron decreased length , abnormal
spinal cord motor neuron decreased branchiness , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
eye position , abnormal
Show

 ZFA:0000547 mouth mouth open , abnormal
Show

 ZFA:0001094 whole organism whole organism shape , abnormal
whole organism bent , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

 ZFA:0001115 trunk trunk bent , abnormal
trunk curved ventral , abnormal
Show

 ZFA:0001161 pectoral fin pectoral fin uncoordinated , abnormal
pectoral fin movement quality , abnormal
Show

 ZFA:0001227 mandibular arch skeleton mandibular arch skeleton increased mobility , abnormal
Show

 ZFA:0009052 motor neuron motor neuron neuromuscular junction disorganized , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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