ENSDARG00000015676


Danio rerio

Features
Gene ID: ENSDARG00000015676
  
Biological name :nmd3
  
Synonyms : nmd3 / NMD3 ribosome export adaptor / Q5BLF0
  
Possible biological names infered from orthology : 60S ribosomal export protein NMD3 / Q96D46 / Q99L48
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 1653779
Gene end: 1672461
  
Corresponding Affymetrix probe sets: Dr.2745.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000012858
NCBI entrez gene - 541444     See in Manteia.
RefSeq - NM_001013569
RefSeq Peptide - NP_001013587
swissprot - Q5BLF0
ZFIN ID - ZDB-GENE-050320-149
Ensembl - ENSDARG00000015676
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NMD3ENSGALG00000009533Gallus gallus
 NMD3ENSG00000169251Homo sapiens
 Nmd3ENSMUSG00000027787Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007064  NMD3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000055 ribosomal large subunit export from nucleus IBA
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0043023 ribosomal large subunit binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000112 gut gut quality , abnormal
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 ZFA:0000114 heart heart quality , abnormal
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 ZFA:0000123 liver liver quality , abnormal
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 ZFA:0001114 head head quality , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr