ENSDARG00000015757


Danio rerio

Features
Gene ID: ENSDARG00000015757
  
Biological name :tmem50a
  
Synonyms : tmem50a / transmembrane protein 50A
  
Possible biological names infered from orthology : O95807 / Q9CXL1
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 45485185
Gene end: 45495562
  
Corresponding Affymetrix probe sets: Dr.6908.1.S1_at (Zebrafish Array)   NM_213529_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000120219
Ensembl peptide - ENSDARP00000147889
Ensembl peptide - ENSDARP00000009902
Ensembl peptide - ENSDARP00000116685
NCBI entrez gene - 406850     See in Manteia.
RefSeq - NM_213529
RefSeq - XM_005157050
RefSeq Peptide - NP_998694
swissprot - B8A503
swissprot - Q803R8
ZFIN ID - ZDB-GENE-040426-2937
Ensembl - ENSDARG00000015757
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMEM50AENSGALG00000043733Gallus gallus
 O95807ENSG00000183726Homo sapiens
 Q9CXL1ENSMUSG00000028822Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007919  Uncharacterised protein family UPF0220
 IPR023388  Bacteriocin class IIa domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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