ENSDARG00000017261


Danio rerio

Features
Gene ID: ENSDARG00000017261
  
Biological name :gdpd1
  
Synonyms : gdpd1 / glycerophosphodiester phosphodiesterase domain containing 1
  
Possible biological names infered from orthology : Lysophospholipase D GDPD1 / Q8N9F7 / Q9CRY7
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 16886196
Gene end: 16894875
  
Corresponding Affymetrix probe sets: Dr.4315.1.A1_at (Zebrafish Array)   NM_001004118_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000113260
Ensembl peptide - ENSDARP00000049195
NCBI entrez gene - 445504     See in Manteia.
RefSeq - NM_001004118
RefSeq - XM_005157420
RefSeq Peptide - NP_001004118
swissprot - Q68EJ8
swissprot - E9QGI5
ZFIN ID - ZDB-GENE-040822-22
Ensembl - ENSDARG00000017261
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GDPD1ENSGALG00000005103Gallus gallus
 GDPD1ENSG00000153982Homo sapiens
 Gdpd1ENSMUSG00000061666Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gdpd3b / glycerophosphodiester phosphodiesterase domain containing 3b / GDPD3* / Q7L5L3* / Q99LY2* / Lysophospholipase D GDPD3 * / glycerophosphodiester phosphodiesterase domain containing 3*ENSDARG0000000694448
gdpd3a / glycerophosphodiester phosphodiesterase domain containing 3a / GDPD3* / Q7L5L3* / Q99LY2* / Lysophospholipase D GDPD3 * / glycerophosphodiester phosphodiesterase domain containing 3*ENSDARG0000007446647


Protein motifs (from Interpro)
Interpro ID Name
 IPR017946  PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily
 IPR030395  Glycerophosphodiester phosphodiesterase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008081 phosphoric diester hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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