ENSDARG00000017355


Danio rerio

Features
Gene ID: ENSDARG00000017355
  
Biological name :rsph9
  
Synonyms : Q5TYW6 / radial spoke head 9 homolog / rsph9
  
Possible biological names infered from orthology : Q9D9V4 / Q9H1X1 / Radial spoke head
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 5645251
Gene end: 5652030
  
Corresponding Affymetrix probe sets: Dr.12153.1.A1_at (Zebrafish Array)   NM_001030113_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000017411
NCBI entrez gene - 558005     See in Manteia.
RefSeq - NM_001030113
RefSeq Peptide - NP_001025284
swissprot - Q5TYW6
ZFIN ID - ZDB-GENE-051120-129
Ensembl - ENSDARG00000017355
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RSPH9ENSGALG00000010299Gallus gallus
 RSPH9ENSG00000172426Homo sapiens
 Rsph9ENSMUSG00000023966Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006802  Radial spokehead-like protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003341 cilium movement IMP
 biological_processGO:0035082 axoneme assembly IMP
 biological_processGO:0044458 motile cilium assembly IBA
 biological_processGO:0060294 cilium movement involved in cell motility IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0005930 axoneme IC
 cellular_componentGO:0031514 motile cilium IC
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000075 spinal cord spinal cord cilium movement process quality , abnormal
Show

 ZFA:0000130 olfactory pit olfactory pit obstructed , abnormal
olfactory pit cilium non-functional , abnormal
olfactory pit cilium decreased functionality , abnormal
Show

 ZFA:0000150 pronephric duct pronephric duct axoneme structure , abnormal
Show

 ZFA:0000554 olfactory epithelium olfactory epithelium 9+2 motile cilium absent , abnormal
olfactory epithelium 9+2 motile cilium decreased mobility , abnormal
Show

 ZFA:0001135 neural tube neural tube axoneme structure , abnormal
Show

 ZFA:0007038 anterior neural tube anterior neural tube axoneme structure , abnormal
Show

 ZFA:0007042 spinal cord neural tube spinal cord neural tube axoneme structure , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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