ENSDARG00000017595


Danio rerio

Features
Gene ID: ENSDARG00000017595
  
Biological name :ccdc6b
  
Synonyms : ccdc6b / coiled-coil domain containing 6b
  
Possible biological names infered from orthology : CCDC6 / coiled-coil domain containing 6 / Coiled-coil domain-containing protein 6 / D3YZP9 / Q16204
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 7609928
Gene end: 7639149
  
Corresponding Affymetrix probe sets: Dr.15148.1.A1_at (Zebrafish Array)   Dr.17552.1.S1_at (Zebrafish Array)   NM_200241_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000108416
Ensembl peptide - ENSDARP00000107622
NCBI entrez gene - 393211     See in Manteia.
RefSeq - NM_200241
RefSeq Peptide - NP_956535
swissprot - A0AUQ3
swissprot - Q7ZUV9
ZFIN ID - ZDB-GENE-040426-869
Ensembl - ENSDARG00000017595
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CCDC6ENSGALG00000003165Gallus gallus
 CCDC6ENSG00000108091Homo sapiens
 Ccdc6ENSMUSG00000048701Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ccdc6a / coiled-coil domain containing 6a / CCDC6* / Q16204* / D3YZP9* / coiled-coil domain containing 6* / Coiled-coil domain-containing protein 6 *ENSDARG0000004333487


Protein motifs (from Interpro)
Interpro ID Name
 IPR019152  Protein of unknown function DUF2046


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr