ENSDARG00000017696


Danio rerio

Features
Gene ID: ENSDARG00000017696
  
Biological name :diexf
  
Synonyms : diexf / digestive organ expansion factor homolog / Q6PEH4
  
Possible biological names infered from orthology : digestive organ expansion factor homolog (zebrafish) / Q68CQ4
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 31925254
Gene end: 31938640
  
Corresponding Affymetrix probe sets: Dr.5257.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000011386
Ensembl peptide - ENSDARP00000146837
swissprot - Q6PEH4
ZFIN ID - ZDB-GENE-021217-2
Ensembl - ENSDARG00000017696
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DIEXFENSGALG00000009887Gallus gallus
 DIEXFENSG00000117597Homo sapiens
 DiexfENSMUSG00000016181Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR010678  Digestive organ expansion factor, predicted
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IMP
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0030163 protein catabolic process IGI
 biological_processGO:0031017 exocrine pancreas development IMP
 biological_processGO:0031648 protein destabilization IMP
 biological_processGO:0035265 organ growth IMP
 biological_processGO:0042254 ribosome biogenesis IMP
 biological_processGO:0048485 sympathetic nervous system development IMP
 biological_processGO:0048546 digestive tract morphogenesis IMP
 biological_processGO:0090594 inflammatory response to wounding IMP
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0032040 small-subunit processome IBA
 molecular_functionGO:0019843 rRNA binding IBA
 molecular_functionGO:0034511 U3 snoRNA binding IBA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0000112 gut gut hypoplastic , abnormal
gut quality , abnormal
Show

 ZFA:0000123 liver liver decreased size , abnormal
liver connective tissue replacement involved in inflammatory response wound healing process quality , abnormal
liver tissue remodeling process quality , abnormal
liver quality , abnormal
Show

 ZFA:0000339 digestive system digestive system hypoplastic , abnormal
Show

 ZFA:0001094 whole organism whole organism viability , abnormal
whole organism decreased life span , abnormal
whole organism increased amount , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
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 ZFA:0001345 interrenal gland interrenal gland nucleolus increased distribution , abnormal
interrenal gland apoptotic process occurrence , exacerbated
interrenal gland cell proliferation occurrence , ameliorated
interrenal gland neuroblastoma proliferative , ameliorated
interrenal gland cell amount , ameliorated
interrenal gland neoplastic , abnormal
interrenal gland neuroblastoma present , ameliorated
interrenal gland nucleolus spatial pattern , ameliorated
interrenal gland nucleolus area , ameliorated
interrenal gland neuroblastoma size , ameliorated
Show

 ZFA:0001439 anatomical system anatomical system quality , abnormal
Show

 ZFA:0001572 superior cervical ganglion superior cervical ganglion decreased size , abnormal
superior cervical ganglion hypoplastic , abnormal
superior cervical ganglion decreased distribution , abnormal
superior cervical ganglion decreased amount , abnormal
Show

 ZFA:0005123 gut epithelium gut epithelium morphology , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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