ENSDARG00000017917


Danio rerio

Features
Gene ID: ENSDARG00000017917
  
Biological name :her7
  
Synonyms : hairy and enhancer of split related-7 / her7
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 68807170
Gene end: 68808485
  
Corresponding Affymetrix probe sets: Dr.3696.1.S1_at (Zebrafish Array)   NM_131609_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000006074
NCBI entrez gene - 58132     See in Manteia.
RefSeq - NM_131609
RefSeq Peptide - NP_571684
swissprot - A3KQ57
ZFIN ID - ZDB-GENE-000427-6
Ensembl - ENSDARG00000017917
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003650  Orange domain
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001756 somitogenesis IMP
 biological_processGO:0001757 somite specification IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0009952 anterior/posterior pattern specification IGI
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000610 vertical myoseptum vertical myoseptum irregular spatial pattern , abnormal
Show

 ZFA:0000725 somite 11 somite 11 somite border amorphous , abnormal
Show

 ZFA:0000726 somite 14 somite 14 somite border amorphous , abnormal
Show

 ZFA:0000727 somite 17 somite 17 somite border amorphous , abnormal
Show

 ZFA:0000851 somite 12 somite 12 somite border amorphous , abnormal
Show

 ZFA:0000852 somite 15 somite 15 somite border amorphous , abnormal
Show

 ZFA:0000974 somite 10 somite 10 somite border amorphous , abnormal
Show

 ZFA:0000975 somite 13 somite 13 somite border amorphous , abnormal
Show

 ZFA:0000976 somite 16 somite 16 somite border amorphous , abnormal
Show

 ZFA:0000983 somite 9 somite 9 somite border amorphous , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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