ENSDARG00000018153


Danio rerio

Features
Gene ID: ENSDARG00000018153
  
Biological name :nt5c1ba
  
Synonyms : 5-nucleotidase, cytosolic IB a / nt5c1ba
  
Possible biological names infered from orthology : 5-nucleotidase, cytosolic IB / NT5C1B / NT5C1B-RDH14 / NT5C1B-RDH14 readthrough / Q91YE9 / Q96P26
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 32446169
Gene end: 32453932
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000115075
NCBI entrez gene - 798022     See in Manteia.
RefSeq - NM_001089444
RefSeq Peptide - NP_001082913
swissprot - B8JIJ6
ZFIN ID - ZDB-GENE-070424-103
Ensembl - ENSDARG00000018153
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000016471Gallus gallus
 NT5C1BENSG00000185013Homo sapiens
 NT5C1B-RDH14ENSG00000250741Homo sapiens
 Nt5c1bENSMUSG00000020622Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nt5c1bb / 5-nucleotidase, cytosolic IB b / Q96P26* / NT5C1B* / Q91YE9* / NT5C1B-RDH14* / NT5C1B-RDH14 readthrough* / 5-nucleotidase, cytosolic IB*ENSDARG0000003374273
nt5c1ab / 5-nucleotidase, cytosolic IAb / A3KFX0* / NT5C1A* / Q9BXI3* / 5-nucleotidase, cytosolic IA*ENSDARG0000007059060
nt5c1aa / 5-nucleotidase, cytosolic IAa / A3KFX0* / NT5C1A* / Q9BXI3* / 5-nucleotidase, cytosolic IA*ENSDARG0000003588359
FQ976913.1ENSDARG0000011036122


Protein motifs (from Interpro)
Interpro ID Name
 IPR010394  5-nucleotidase
 IPR023214  HAD superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009117 nucleotide metabolic process IEA
 biological_processGO:0016311 dephosphorylation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0000287 magnesium ion binding IEA
 molecular_functionGO:0008253 5"-nucleotidase activity IEA


Pathways (from Reactome)
Pathway description
Purine catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr