ENSDARG00000018658


Danio rerio

Features
Gene ID: ENSDARG00000018658
  
Biological name :aar2
  
Synonyms : aar2 / AAR2 splicing factor homolog (S. cerevisiae)
  
Possible biological names infered from orthology : AAR2 splicing factor homolog / Q9D2V5 / Q9Y312
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 4216196
Gene end: 4225830
  
Corresponding Affymetrix probe sets: Dr.18910.1.A1_at (Zebrafish Array)   NM_001002221_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000121479
Ensembl peptide - ENSDARP00000013455
Ensembl peptide - ENSDARP00000132833
NCBI entrez gene - 431768     See in Manteia.
RefSeq - NM_001002221
RefSeq - XM_005161924
RefSeq Peptide - NP_001002221
swissprot - F1R8D9
swissprot - E9QBA9
ZFIN ID - ZDB-GENE-040704-68
Ensembl - ENSDARG00000018658
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AAR2ENSGALG00000001034Gallus gallus
 AAR2ENSG00000131043Homo sapiens
 Aar2ENSMUSG00000027628Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007946  A1 cistron-splicing factor, AAR2
 IPR033647  AAR2, N-terminal
 IPR033648  AAR2, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000244 spliceosomal tri-snRNP complex assembly IBA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr