ENSDARG00000018840


Danio rerio

Features
Gene ID: ENSDARG00000018840
  
Biological name :trpc4apa
  
Synonyms : transient receptor potential cation channel, subfamily C, member 4 associated protein a / trpc4apa
  
Possible biological names infered from orthology : Q8TEL6 / Q9JLV2 / transient receptor potential cation channel subfamily C member 4 associated protein / TRPC4AP
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 25157374
Gene end: 25180330
  
Corresponding Affymetrix probe sets: Dr.172.1.S1_at (Zebrafish Array)   NM_131569_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000012730
NCBI entrez gene - 58090     See in Manteia.
RefSeq - NM_131569
RefSeq Peptide - NP_571644
swissprot - F1QM16
ZFIN ID - ZDB-GENE-000330-3
Ensembl - ENSDARG00000018840
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRPC4APENSGALG00000003147Gallus gallus
 Q8TEL6ENSG00000100991Homo sapiens
 Q9JLV2ENSMUSG00000038324Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trpc4apb / transient receptor potential cation channel, subfamily C, member 4 associated protein b / Q8TEL6* / Q9JLV2* / TRPC4AP* / transient receptor potential cation channel subfamily C m...ENSDARG0000002064764


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR022162  Short transient receptor potential channel 4-associated protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 cellular_componentGO:0031464 Cul4A-RING E3 ubiquitin ligase complex IEA


Pathways (from Reactome)
Pathway description
TRP channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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