ENSDARG00000019137


Danio rerio

Features
Gene ID: ENSDARG00000019137
  
Biological name :tram1
  
Synonyms : tram1 / translocation associated membrane protein 1
  
Possible biological names infered from orthology : Q15629 / Q8N609 / Q8QZR0 / Q91V04 / TRAM1L1 / Translocating chain-associated membrane protein 1-like 1 / translocating chain-associating membrane protein 1 / translocation associated membrane protein 1 like 1
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 14214831
Gene end: 14234824
  
Corresponding Affymetrix probe sets: Dr.3648.1.S1_at (Zebrafish Array)   Dr.3648.1.S2_at (Zebrafish Array)   NM_153669_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000022511
NCBI entrez gene - 266757     See in Manteia.
RefSeq - NM_153669
RefSeq Peptide - NP_705955
swissprot - Q6P4U7
ZFIN ID - ZDB-GENE-021011-1
Ensembl - ENSDARG00000019137
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRAM1ENSGALG00000041112Gallus gallus
 Q8N609ENSG00000174599Homo sapiens
 TRAM1ENSG00000067167Homo sapiens
 Q8QZR0ENSMUSG00000044528Mus musculus
 Tram1ENSMUSG00000025935Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:113278ENSDARG0000003781366
tram2 / translocation associated membrane protein 2 / Q15035* / Q924Z5* / Translocating chain-associated membrane protein 2 *ENSDARG0000003009244


Protein motifs (from Interpro)
Interpro ID Name
 IPR006634  TRAM/LAG1/CLN8 homology domain
 IPR013599  TRAM1-like protein
 IPR016447  Translocation associated membrane protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr