ENSDARG00000019195


Danio rerio

Features
Gene ID: ENSDARG00000019195
  
Biological name :vps9d1
  
Synonyms : vps9d1 / VPS9 domain containing 1
  
Possible biological names infered from orthology : Q8C190 / Q9Y2B5
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 14633974
Gene end: 14668398
  
Corresponding Affymetrix probe sets: Dr.20479.1.S1_at (Zebrafish Array)   Dr.20479.2.A1_at (Zebrafish Array)   Dr.20479.3.S1_at (Zebrafish Array)   Dr.26383.1.A1_at (Zebrafish Array)   NM_001013351_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000117841
Ensembl peptide - ENSDARP00000122725
Ensembl peptide - ENSDARP00000120482
NCBI entrez gene - 503773     See in Manteia.
RefSeq - NM_001013351
RefSeq - XM_005169930
RefSeq Peptide - NP_001013369
swissprot - A5WVN9
swissprot - A5WVP1
swissprot - A5WVP0
ZFIN ID - ZDB-GENE-050306-57
Ensembl - ENSDARG00000019195
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VPS9D1ENSGALG00000023468Gallus gallus
 Q9Y2B5ENSG00000075399Homo sapiens
 Q8C190ENSMUSG00000001062Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003123  VPS9 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr