ENSDARG00000019300


Danio rerio

Features
Gene ID: ENSDARG00000019300
  
Biological name :ints7
  
Synonyms : integrator complex subunit 7 / ints7 / Q8JGR7
  
Possible biological names infered from orthology : integrator complex subunit 7 isoform 2 / Q9NVH2
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 13020489
Gene end: 13142357
  
Corresponding Affymetrix probe sets: Dr.17434.1.S1_a_at (Zebrafish Array)   NM_173267_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000151266
Ensembl peptide - ENSDARP00000152620
Ensembl peptide - ENSDARP00000008647
Ensembl peptide - ENSDARP00000126695
NCBI entrez gene - 286776     See in Manteia.
RefSeq - NM_173267
RefSeq - XM_021468353
RefSeq Peptide - NP_775374
swissprot - B3DKN3
swissprot - Q8JGR7
ZFIN ID - ZDB-GENE-021220-6
Ensembl - ENSDARG00000019300
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 INTS7ENSGALG00000009843Gallus gallus
 INTS7ENSG00000143493Homo sapiens
 Ints7ENSMUSG00000037461Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR033060  Integrator complex subunit 7


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002088 lens development in camera-type eye IMP
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0016180 snRNA processing IEA
 biological_processGO:0034472 snRNA 3"-end processing IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0032039 integrator complex IBA


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000035 lens lens quality , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000095 pharyngeal arch 3-7 skeleton pharyngeal arch 3-7 skeleton quality , abnormal
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 ZFA:0001114 head head decreased width , abnormal
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 ZFA:0001227 mandibular arch skeleton mandibular arch skeleton shape , abnormal
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 ZFA:0001580 neurocranium neurocranium shape , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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