ENSDARG00000019961


Danio rerio

Features
Gene ID: ENSDARG00000019961
  
Biological name :znf513a
  
Synonyms : zinc finger protein 513a / znf513a
  
Possible biological names infered from orthology : Q6PD29 / Q8N8E2 / Zfp513 / zinc finger protein 513 / ZNF513
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 19423823
Gene end: 19432766
  
Corresponding Affymetrix probe sets: Dr.18688.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000126626
NCBI entrez gene - 568216     See in Manteia.
swissprot - R4GDS0
ZFIN ID - ZDB-GENE-030131-9895
Ensembl - ENSDARG00000019961
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000016516Gallus gallus
 Q8N8E2ENSG00000163795Homo sapiens
 Q6PD29ENSMUSG00000043059Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
znf513b / zinc finger protein 513b / Q8N8E2* / ZNF513* / zinc finger protein 513*ENSDARG0000010120353
ZNF462 / zinc finger protein 462 / Q96JM2*ENSDARG0000011290918
znf142 / zinc finger protein 142 / P52746* / Zfp142*ENSDARG0000006137317


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0060041 retina development in camera-type eye IMP
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000024 retinal ganglion cell layer retinal ganglion cell layer decreased thickness , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0000119 retinal inner nuclear layer retinal inner nuclear layer decreased thickness , abnormal
Show

 ZFA:0001464 retinal outer nuclear layer retinal outer nuclear layer decreased thickness , abnormal
Show

 ZFA:0009262 retinal cone cell retinal cone cell decreased amount , abnormal
Show

 ZFA:0009275 retinal rod cell retinal rod cell decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr