ENSDARG00000019976


Danio rerio

Features
Gene ID: ENSDARG00000019976
  
Biological name :idi1
  
Synonyms : idi1 / isopentenyl-diphosphate delta isomerase 1
  
Possible biological names infered from orthology : Gm9745 / IDI2 / isopentenyl-diphosphate delta isomerase 2 / Q13907 / Q8BFZ6 / Q9BXS1
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 3469373
Gene end: 3477103
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000122260
NCBI entrez gene - 553513     See in Manteia.
RefSeq - NM_001025475
RefSeq - XM_005162508
RefSeq Peptide - NP_001020646
swissprot - F1QVG2
ZFIN ID - ZDB-GENE-050913-44
Ensembl - ENSDARG00000019976
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000006723Gallus gallus
 IDI1ENSG00000067064Homo sapiens
 IDI2ENSG00000148377Homo sapiens
 Gm9745ENSMUSG00000021148Mus musculus
 Idi1ENSMUSG00000058258Mus musculus
 Idi2ENSMUSG00000033520Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000086  NUDIX hydrolase domain
 IPR011876  Isopentenyl-diphosphate delta-isomerase, type 1
 IPR015797  NUDIX hydrolase-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008299 isoprenoid biosynthetic process IEA
 biological_processGO:0009240 isopentenyl diphosphate biosynthetic process IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004452 isopentenyl-diphosphate delta-isomerase activity IBA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Cholesterol biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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