ENSDARG00000020133


Danio rerio

Features
Gene ID: ENSDARG00000020133
  
Biological name :jdp2b
  
Synonyms : jdp2b / Jun dimerization protein 2b / Q6DGM8
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 46586678
Gene end: 46595151
  
Corresponding Affymetrix probe sets: Dr.10032.1.S1_at (Zebrafish Array)   NM_001002493_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000010866
Ensembl peptide - ENSDARP00000144615
NCBI entrez gene - 436766     See in Manteia.
RefSeq - NM_001002493
RefSeq Peptide - NP_001002493
swissprot - Q6DGM8
ZFIN ID - ZDB-GENE-040718-197
Ensembl - ENSDARG00000020133
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
jdp2a / Jun dimerization protein 2a / JDP2* / Q8WYK2* / P97875* / Jun dimerization protein 2*ENSDARG0000004013770
atf3 / activating transcription factor 3 / P18847*ENSDARG0000000782346


Protein motifs (from Interpro)
Interpro ID Name
 IPR000837  AP-1 transcription factor
 IPR004827  Basic-leucine zipper domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr