ENSDARG00000020887


Danio rerio

Features
Gene ID: ENSDARG00000020887
  
Biological name :armc1l
  
Synonyms : armadillo repeat containing 1, like / armc1l
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 31912882
Gene end: 31919155
  
Corresponding Affymetrix probe sets: Dr.12488.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000114296
Ensembl peptide - ENSDARP00000116279
NCBI entrez gene - 321240     See in Manteia.
swissprot - E9QBK0
swissprot - F1R385
ZFIN ID - ZDB-GENE-030131-9819
Ensembl - ENSDARG00000020887
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
armc1 / armadillo repeat containing 1 / Q9D7A8* / Q9NVT9* / Mus musculus armadillo repeat containing 1 (Armc1), transcript variant 2, mRNA.*ENSDARG0000001386153


Protein motifs (from Interpro)
Interpro ID Name
 IPR000225  Armadillo
 IPR006121  Heavy metal-associated domain, HMA
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR016617  Uncharacterised conserved protein UCP013899, metal binding


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030001 metal ion transport IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr