ENSDARG00000020893


Danio rerio

Features
Gene ID: ENSDARG00000020893
  
Biological name :slc25a55a
  
Synonyms : slc25a55a / solute carrier family 25, member 55a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 49095636
Gene end: 49107046
  
Corresponding Affymetrix probe sets: Dr.17850.1.S1_at (Zebrafish Array)   NM_213408_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000094162
NCBI entrez gene - 406717     See in Manteia.
RefSeq - XM_017356461
RefSeq - NM_213408
RefSeq - XM_005172105
RefSeq Peptide - NP_998573
swissprot - Q7ZTT6
ZFIN ID - ZDB-GENE-040426-2745
Ensembl - ENSDARG00000020893
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc25a55b / solute carrier family 25, member 55bENSDARG0000001374977
slc25a22a / solute carrier family 25 member 22a / Q9H936* / Q9D6M3* / SLC25A22* / solute carrier family 25 member 22* / solute carrier family 25 (mitochondrial carrier, glutamate), member 22*ENSDARG0000002071869
slc25a22b / solute carrier family 25 member 22b / Q9H936* / Q9D6M3* / SLC25A22* / solute carrier family 25 member 22* / solute carrier family 25 (mitochondrial carrier, glutamate), member 22*ENSDARG0000005833667
slc25a18 / solute carrier family 25 (glutamate carrier), member 18 / Q9H1K4* / Q9DB41* / solute carrier family 25 member 18* / solute carrier family 25 (mitochondrial carrier), member 18*ENSDARG0000007071765
slc25a12 / solute carrier family 25 (aspartate/glutamate carrier), member 12ENSDARG0000010236239
slc25a13 / solute carrier family 25 (aspartate/glutamate carrier), member 13 / Q9UJS0* / Q9QXX4* / solute carrier family 25 member 13* / solute carrier family 25 (mitochondrial carrier, ade...ENSDARG0000009935338
slc25a44b / solute carrier family 25, member 44 b / Q8BGF9* / Q96H78* / SLC25A44* / solute carrier family 25 member 44*ENSDARG0000003590522
slc25a44a / solute carrier family 25, member 44 a / Q8BGF9* / Q96H78* / SLC25A44* / solute carrier family 25 member 44*ENSDARG0000004592721


Protein motifs (from Interpro)
Interpro ID Name
 IPR002067  Mitochondrial carrier protein
 IPR018108  Mitochondrial substrate/solute carrier
 IPR023395  Mitochondrial carrier domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006839 mitochondrial transport IBA
 biological_processGO:0015813 L-glutamate transmembrane transport ISS
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005743 mitochondrial inner membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 molecular_functionGO:0005313 L-glutamate transmembrane transporter activity ISS
 molecular_functionGO:0005314 high-affinity glutamate transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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