ENSDARG00000021582


Danio rerio

Features
Gene ID: ENSDARG00000021582
  
Biological name :dynlrb1
  
Synonyms : dynein, light chain, roadblock-type 1 / dynlrb1
  
Possible biological names infered from orthology : P62627 / Q9NP97
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 26604224
Gene end: 26608636
  
Corresponding Affymetrix probe sets: Dr.13687.1.S1_at (Zebrafish Array)   NM_201188_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000131355
Ensembl peptide - ENSDARP00000138227
Ensembl peptide - ENSDARP00000038553
NCBI entrez gene - 394163     See in Manteia.
RefSeq - NM_201188
RefSeq Peptide - NP_957482
swissprot - A0A0R4IND4
swissprot - Q7ZUX8
ZFIN ID - ZDB-GENE-040426-989
Ensembl - ENSDARG00000021582
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000034509Gallus gallus
 Q9NP97ENSG00000125971Homo sapiens
 P62627ENSMUSG00000047459Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-147k9.8 / Q8TF09* / Q9DAJ5* / DYNLRB2* / dynein light chain roadblock-type 2*ENSDARG0000008995270
dynlrb1 / dynein, light chain, roadblock-type 1 / P62627* / Q9NP97*ENSDARG0000010423348


Protein motifs (from Interpro)
Interpro ID Name
 IPR004942  Roadblock/LAMTOR2 domain
 IPR016561  Dynein light chain roadblock-type 1/2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007018 microtubule-based movement IEA
 biological_processGO:0007179 transforming growth factor beta receptor signaling pathway IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005868 cytoplasmic dynein complex IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0030286 dynein complex IDA
 cellular_componentGO:0036157 outer dynein arm IBA
 molecular_functionGO:0003774 motor activity IEA
 molecular_functionGO:0045505 dynein intermediate chain binding IDA


Pathways (from Reactome)
Pathway description
Intraflagellar transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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