ENSDARG00000023724


Danio rerio

Features
Gene ID: ENSDARG00000023724
  
Biological name :cdc42se1
  
Synonyms : cdc42se1 / CDC42 small effector 1 / Q6TEL3
  
Possible biological names infered from orthology : CDC42 small effector protein 1 / Q8BHL7 / Q9NRR8
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 38311887
Gene end: 38333976
  
Corresponding Affymetrix probe sets: Dr.844.1.S1_at (Zebrafish Array)   NM_200060_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000034273
NCBI entrez gene - 791998     See in Manteia.
RefSeq - NM_200060
RefSeq Peptide - NP_956354
swissprot - Q6TEL3
ZFIN ID - ZDB-GENE-030131-9260
Ensembl - ENSDARG00000023724
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q5ZKB1ENSGALG00000028119Gallus gallus
 Q9NRR8ENSG00000197622Homo sapiens
 Q8BHL7ENSMUSG00000046722Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A9JR56 / cdc42se2 / CDC42 small effector 2 / Q9NRR3* / Q8BGH7* / CDC42 small effector protein 2 *ENSDARG0000009457748


Protein motifs (from Interpro)
Interpro ID Name
 IPR000095  CRIB domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IBA
 biological_processGO:0008360 regulation of cell shape IEA
 biological_processGO:0021555 midbrain-hindbrain boundary morphogenesis IGI
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005198 structural molecule activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary absent , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr