ENSDARG00000024017


Danio rerio

Features
Gene ID: ENSDARG00000024017
  
Biological name :mdga2a
  
Synonyms : MAM domain containing glycosylphosphatidylinositol anchor 2a / mdga2a
  
Possible biological names infered from orthology : MAM domain containing glycosylphosphatidylinositol anchor 2 / MAM domain-containing glycosylphosphatidylinositol anchor protein 2 / MDGA2 / P60755 / Q7Z553
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 28340138
Gene end: 28564070
  
Corresponding Affymetrix probe sets: Dr.16681.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000128977
Ensembl peptide - ENSDARP00000133653
Ensembl peptide - ENSDARP00000028542
NCBI entrez gene - 368826     See in Manteia.
swissprot - A0A0R4IIK9
swissprot - F1RDD1
swissprot - X1WFH3
ZFIN ID - ZDB-GENE-030616-360
Ensembl - ENSDARG00000024017
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MDGA2ENSGALG00000012228Gallus gallus
 MDGA2ENSG00000139915Homo sapiens
 Mdga2ENSMUSG00000034912Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mdga1 / MAM domain containing glycosylphosphatidylinositol anchor 1 / Q8NFP4*ENSDARG0000007437641
malrd1 / MAM and LDL receptor class A domain containing 1 / A2AJX4* / Q5VYJ5* / MAM and LDL-receptor class A domain-containing protein 1 *ENSDARG0000009061816
mamdc2b / MAM domain containing 2b / MAMDC2* / Q7Z304* / MAM domain containing 2*ENSDARG0000007369513
mamdc2a / MAM domain containing 2a / MAMDC2* / Q7Z304* / MAM domain containing 2*ENSDARG0000009834512
si:dkey-11o18.5 / A2AJA7* / MAMDC4* / Q6UXC1* / MAM domain containing 4*ENSDARG0000008763312
si:ch211-106h4.4ENSDARG000000936298


Protein motifs (from Interpro)
Interpro ID Name
 IPR000998  MAM domain
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003961  Fibronectin type III
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0021611 facial nerve formation IMP
 biological_processGO:0021731 trigeminal motor nucleus development IMP
 biological_processGO:1905483 regulation of motor neuron migration IMP
 cellular_componentGO:0016020 membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000051 otic vesicle otic vesicle hair cell absent , abnormal
Show

 ZFA:0000543 medial longitudinal fasciculus medial longitudinal fasciculus decreased amount , abnormal
Show

 ZFA:0000664 cranial nerve VII cranial nerve VII axon defasciculated , abnormal
cranial nerve VII collateral sprouting in absence of injury increased occurrence , abnormal
cranial nerve VII decreased amount , abnormal
Show

 ZFA:0000697 cranial nerve V cranial nerve V absent , abnormal
cranial nerve V decreased amount , abnormal
Show

 ZFA:0000944 posterior lateral line posterior lateral line decreased amount , abnormal
Show

 ZFA:0001365 trigeminal motor nucleus trigeminal motor nucleus motor neuron migration process quality , abnormal
trigeminal motor nucleus cranial motor neuron mislocalised , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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