ENSDARG00000024211


Danio rerio

Features
Gene ID: ENSDARG00000024211
  
Biological name :ifng1-2
  
Synonyms : ifng1-2 / interferon, gamma 1-2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 13507584
Gene end: 13509946
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000122851
NCBI entrez gene - 405790     See in Manteia.
RefSeq - NM_212864
RefSeq Peptide - NP_998029
swissprot - Q5RHV5
ZFIN ID - ZDB-GENE-040629-1
Ensembl - ENSDARG00000024211
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002069  Interferon gamma
 IPR009079  Four-helical cytokine-like, core


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002250 adaptive immune response IBA
 biological_processGO:0006955 immune response IDA
 biological_processGO:0006959 humoral immune response IBA
 biological_processGO:0009615 response to virus IDA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0030097 hemopoiesis IMP
 biological_processGO:0042742 defense response to bacterium IMP
 biological_processGO:0098508 endothelial to hematopoietic transition IMP
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 molecular_functionGO:0005125 cytokine activity IBA
 molecular_functionGO:0005133 interferon-gamma receptor binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism viability , abnormal
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 ZFA:0005028 ventral wall of dorsal aorta ventral wall of dorsal aorta has fewer parts of type hematopoietic stem cell , abnormal
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 ZFA:0009014 hematopoietic stem cell hematopoietic stem cell decreased amount , abnormal
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 ZFA:0009065 endothelial cell endothelial cell cell proliferation increased rate , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr