ENSDARG00000024465


Danio rerio

Features
Gene ID: ENSDARG00000024465
  
Biological name :mrps18a
  
Synonyms : mitochondrial ribosomal protein S18A / mrps18a
  
Possible biological names infered from orthology : Q9NVS2
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 5642696
Gene end: 5645166
  
Corresponding Affymetrix probe sets: Dr.14790.1.S1_at (Zebrafish Array)   NM_001030114_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000037794
NCBI entrez gene - 558080     See in Manteia.
RefSeq - NM_001030114
RefSeq Peptide - NP_001025285
swissprot - Q5TYW5
ZFIN ID - ZDB-GENE-041210-109
Ensembl - ENSDARG00000024465
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MRPS18AENSGALG00000010296Gallus gallus
 Q9NVS2ENSG00000096080Homo sapiens
 Mrps18aENSMUSG00000023967Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001648  Ribosomal protein S18


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0032543 mitochondrial translation IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005763 mitochondrial small ribosomal subunit IBA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IBA
 molecular_functionGO:0003735 structural constituent of ribosome IBA


Pathways (from Reactome)
Pathway description
Mitochondrial translation elongation
Mitochondrial translation termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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