ENSDARG00000024895


Danio rerio

Features
Gene ID: ENSDARG00000024895
  
Biological name :fam50a
  
Synonyms : fam50a / family with sequence similarity 50, member A
  
Possible biological names infered from orthology : FAM50B / family with sequence similarity 50 member B / Protein FAM50A / Protein FAM50B / Q14320 / Q9WTJ8 / Q9WV03 / Q9Y247
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 33987382
Gene end: 34005304
  
Corresponding Affymetrix probe sets: Dr.5671.1.S1_at (Zebrafish Array)   NM_001017636_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000115917
Ensembl peptide - ENSDARP00000028381
NCBI entrez gene - 550329     See in Manteia.
RefSeq - NM_001017636
RefSeq Peptide - NP_001017636
swissprot - F1RCE5
swissprot - F1QAT7
ZFIN ID - ZDB-GENE-050417-110
Ensembl - ENSDARG00000024895
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FAM50AENSG00000071859Homo sapiens
 FAM50BENSG00000145945Homo sapiens
 Fam50aENSMUSG00000001962Mus musculus
 Fam50bENSMUSG00000038246Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007005  XAP5 protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr