ENSDARG00000025275


Danio rerio

Features
Gene ID: ENSDARG00000025275
  
Biological name :gbgt1l1
  
Synonyms : gbgt1l1 / globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1
  
Possible biological names infered from orthology : GBGT1 / Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 / globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) / Q8N5D6 / Q8VI38
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 23702295
Gene end: 23715861
  
Corresponding Affymetrix probe sets: Dr.14499.1.S1_at (Zebrafish Array)   NM_200329_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000124763
Ensembl peptide - ENSDARP00000156104
Ensembl peptide - ENSDARP00000018900
Ensembl peptide - ENSDARP00000117057
NCBI entrez gene - 393300     See in Manteia.
RefSeq - NM_200329
RefSeq Peptide - NP_956623
swissprot - B0R0W7
swissprot - F8W2E0
ZFIN ID - ZDB-GENE-040426-1117
Ensembl - ENSDARG00000025275
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GBGT1ENSGALG00000003340Gallus gallus
 GBGT1ENSG00000148288Homo sapiens
 Gbgt1ENSMUSG00000026829Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-110k5.10 / GBGT1* / Q8N5D6* / Q8VI38* / Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 * / globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)*ENSDARG0000001128383
abo / ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) / GBGT1* / Q8VI38* / Q8N5D6* / Globoside alpha-1,3-N-acety...ENSDARG0000001920759
gbgt1l3 / globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3 / GBGT1* / Q8VI38* / Q8N5D6* / Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 * / globoside alpha-1,3-N-ac...ENSDARG0000003555559
gbgt1l3 / si:ch211-135f11.4 / GBGT1* / Q8N5D6* / Q8VI38* / Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 * / globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)*ENSDARG0000009196958
GBGT1 (1 of many) / si:ch211-287c22.1 / GBGT1* / Q8N5D6* / Q8VI38* / Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 * / globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FOR...ENSDARG0000009194458
gbgt1l4 / globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 4 / GBGT1* / Q8VI38* / Q8N5D6* / Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 * / globoside alpha-1,3-N-ac...ENSDARG0000006850357
gbgt1l2 / globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 2 / GBGT1* / Q8VI38* / Q8N5D6* / Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 * / globoside alpha-1,3-N-ac...ENSDARG0000009271854
GBGT1 (1 of many) / si:ch211-135f11.5 / GBGT1* / Q8N5D6* / Q8VI38* / Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 * / globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FOR...ENSDARG0000009193652


Protein motifs (from Interpro)
Interpro ID Name
 IPR005076  Glycosyl transferase, family 6
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0009247 glycolipid biosynthetic process IBA
 biological_processGO:0030259 lipid glycosylation IBA
 cellular_componentGO:0005794 Golgi apparatus IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031982 vesicle IBA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IBA
 molecular_functionGO:0016758 transferase activity, transferring hexosyl groups IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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