ENSDARG00000025854


Danio rerio

Features
Gene ID: ENSDARG00000025854
  
Biological name :ddx51
  
Synonyms : ddx51 / DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
  
Possible biological names infered from orthology : ATP-dependent RNA helicase DDX51 / DEAD-box helicase 51 / Q6P9R1 / Q8N8A6
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 49065348
Gene end: 49089382
  
Corresponding Affymetrix probe sets: Dr.4368.1.A1_at (Zebrafish Array)   Dr.4368.1.A1_a_at (Zebrafish Array)   Dr.4368.2.A1_at (Zebrafish Array)   Dr.4368.2.A1_x_at (Zebrafish Array)   NM_001003864_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000114414
Ensembl peptide - ENSDARP00000029445
NCBI entrez gene - 445387     See in Manteia.
RefSeq - NM_001003864
RefSeq Peptide - NP_001003864
swissprot - F1R9W2
swissprot - F1QGF7
ZFIN ID - ZDB-GENE-040927-28
Ensembl - ENSDARG00000025854
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DDX51ENSGALG00000032690Gallus gallus
 DDX51ENSG00000185163Homo sapiens
 Ddx51ENSMUSG00000029504Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000629  ATP-dependent RNA helicase DEAD-box, conserved site
 IPR001650  Helicase, C-terminal
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000112 gut gut quality , abnormal
gut hypoplastic , abnormal
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 ZFA:0000114 heart heart quality , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr