ENSDARG00000025972


Danio rerio

Features
Gene ID: ENSDARG00000025972
  
Biological name :mcts1
  
Synonyms : malignant T cell amplified sequence 1 / mcts1
  
Possible biological names infered from orthology : Malignant T-cell-amplified sequence 2 / MCTS1, re-initiation and release factor / Mcts2 / Q9CQ21 / Q9DB27 / Q9ULC4
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 33507608
Gene end: 33513079
  
Corresponding Affymetrix probe sets: Dr.17302.1.S1_at (Zebrafish Array)   NM_201071_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000037227
NCBI entrez gene - 394046     See in Manteia.
RefSeq - NM_201071
RefSeq Peptide - NP_957365
swissprot - F1R3X2
ZFIN ID - ZDB-GENE-040426-957
Ensembl - ENSDARG00000025972
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MCTS1ENSGALG00000008517Gallus gallus
 MCTS1ENSG00000232119Homo sapiens
 Mcts1ENSMUSG00000000355Mus musculus
 Mcts2ENSMUSG00000042814Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002478  PUA domain
 IPR004521  Uncharacterised domain CHP00451
 IPR015947  PUA-like superfamily
 IPR016437  MCT-1/Tma20


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr