ENSDARG00000026109


Danio rerio

Features
Gene ID: ENSDARG00000026109
  
Biological name :slc48a1b
  
Synonyms : Q7T3B2 / slc48a1b / solute carrier family 48 (heme transporter), member 1b
  
Possible biological names infered from orthology : Q6P1K1 / Q9D8M3 / SLC48A1 / solute carrier family 48 (heme transporter), member 1 / solute carrier family 48 member 1
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 38896158
Gene end: 38902498
  
Corresponding Affymetrix probe sets: Dr.6794.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000035010
Ensembl peptide - ENSDARP00000118101
NCBI entrez gene - 792763     See in Manteia.
RefSeq - NM_200006
RefSeq Peptide - NP_956300
swissprot - E9QCL5
swissprot - B7ZVN2
swissprot - Q7T3B2
ZFIN ID - ZDB-GENE-030131-8226
Ensembl - ENSDARG00000026109
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q5ZHU0ENSGALG00000036380Gallus gallus
 Q6P1K1ENSG00000211584Homo sapiens
 Q9D8M3ENSMUSG00000081534Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6ZM28 / slc48a1a / solute carrier family 48 (heme transporter), member 1a / Q6P1K1* / Q9D8M3* / SLC48A1* / solute carrier family 48 member 1* / solute carrier family 48 (heme transporter), member 1*ENSDARG0000002690773


Protein motifs (from Interpro)
Interpro ID Name
 IPR026218  Heme transporter HRG


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015886 heme transport IEA
 biological_processGO:0048821 erythrocyte development IMP
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015232 heme transporter activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain hydrocephalic , abnormal
Show

 ZFA:0000106 extension extension decreased length , abnormal
Show

 ZFA:0001094 whole organism whole organism increased curvature , abnormal
Show

 ZFA:0009256 nucleate erythrocyte nucleate erythrocyte decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr