ENSDARG00000026448


Danio rerio

Features
Gene ID: ENSDARG00000026448
  
Biological name :med29
  
Synonyms : med29 / mediator complex subunit 29 / Q8JHI6
  
Possible biological names infered from orthology : Mediator of RNA polymerase II transcription subunit 29 / Q9DB91 / Q9NX70
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 15232855
Gene end: 15237211
  
Corresponding Affymetrix probe sets: Dr.18298.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000120159
Ensembl peptide - ENSDARP00000031379
NCBI entrez gene - 797134     See in Manteia.
swissprot - F1QD33
swissprot - Q8JHI6
swissprot - B0R0L4
ZFIN ID - ZDB-GENE-021217-1
Ensembl - ENSDARG00000026448
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MED29ENSGALG00000029330Gallus gallus
 MED29ENSG00000063322Homo sapiens
 Med29ENSMUSG00000003444Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR021018  Mediator complex, subunit Med29, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0042462 eye photoreceptor cell development IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016592 mediator complex IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000084 yolk yolk grey , abnormal
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 ZFA:0000107 eye eye quality , abnormal
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 ZFA:0000112 gut gut hypoplastic , abnormal
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 ZFA:0000143 retinal photoreceptor layer retinal photoreceptor layer quality , abnormal
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 ZFA:0000548 musculature system musculature system quality , abnormal
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 ZFA:0001114 head head circular , abnormal
head decreased size , abnormal
head necrotic , abnormal
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 ZFA:0005145 muscle muscle disorganized , abnormal
muscle degenerate , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr