ENSDARG00000026875


Danio rerio

Features
Gene ID: ENSDARG00000026875
  
Biological name :fam57ba
  
Synonyms : fam57ba / family with sequence similarity 57, member Ba
  
Possible biological names infered from orthology : FAM57B / family with sequence similarity 57 member B / Protein FAM57B / Q71RH2 / Q7TNV1
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 21044154
Gene end: 21062778
  
Corresponding Affymetrix probe sets: Dr.11342.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000129798
Ensembl peptide - ENSDARP00000031019
Ensembl peptide - ENSDARP00000127724
Ensembl peptide - ENSDARP00000128911
Ensembl peptide - ENSDARP00000129155
Ensembl peptide - ENSDARP00000129561
Ensembl peptide - ENSDARP00000129707
NCBI entrez gene - 323326     See in Manteia.
swissprot - F1QF55
swissprot - Q6PBV7
swissprot - X1WBY2
swissprot - X1WFA7
swissprot - X1WH51
swissprot - X1WHJ4
swissprot - X1WHT4
ZFIN ID - ZDB-GENE-030131-2046
Ensembl - ENSDARG00000026875
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FAM57BENSG00000149926Homo sapiens
 Fam57bENSMUSG00000058966Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fam57bb / family with sequence similarity 57, member Bb / FAM57B* / Q71RH2* / Q7TNV1* / Protein FAM57B * / family with sequence similarity 57 member B*ENSDARG0000007456474
fam57a / family with sequence similarity 57 member A / Q8TBR7*ENSDARG0000009886040


Protein motifs (from Interpro)
Interpro ID Name
 IPR006634  TRAM/LAG1/CLN8 homology domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001654 eye development IMP
 biological_processGO:0007420 brain development IMP
 biological_processGO:0021952 central nervous system projection neuron axonogenesis IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain morphology , abnormal
Show

 ZFA:0000029 hindbrain hindbrain axon decreased length , abnormal
hindbrain axon disorganized , abnormal
hindbrain increased width , abnormal
Show

 ZFA:0000107 eye eye morphology , abnormal
eye increased distance eye , abnormal
eye increased height , abnormal
eye increased width , abnormal
Show

 ZFA:0000109 forebrain forebrain decreased width , abnormal
forebrain axon decreased size , abnormal
forebrain axon disorganized , abnormal
forebrain increased width , abnormal
Show

 ZFA:0000128 midbrain midbrain shape , abnormal
Show

 ZFA:0000155 somite somite U-shaped , abnormal
Show

 ZFA:0001094 whole organism whole organism movement quality , abnormal
whole organism pigmented , abnormal
whole organism increased length , abnormal
whole organism increased size , abnormal
whole organism increased behavioural activity , abnormal
whole organism increased behavioural activity , exacerbated
whole organism velocity , ameliorated
whole organism behavioural activity , ameliorated
whole organism increased velocity , abnormal
whole organism increased velocity , exacerbated
whole organism lipid increased amount , abnormal
Show

 ZFA:0001114 head head increased height , abnormal
head increased length , abnormal
head increased size , abnormal
Show

 ZFA:0009090 pigment cell pigment cell decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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