ENSDARG00000027140


Danio rerio

Features
Gene ID: ENSDARG00000027140
  
Biological name :nup160
  
Synonyms : nucleoporin 160 / nup160
  
Possible biological names infered from orthology : Nuclear pore complex protein Nup160 / Q12769 / Q9Z0W3
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 34681018
Gene end: 34723976
  
Corresponding Affymetrix probe sets: NM_200662_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000128799
Ensembl peptide - ENSDARP00000145954
NCBI entrez gene - 393635     See in Manteia.
RefSeq - NM_200662
RefSeq Peptide - NP_956956
swissprot - X1WEZ6
ZFIN ID - ZDB-GENE-040426-1603
Ensembl - ENSDARG00000027140
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NUP160ENSGALG00000043074Gallus gallus
 NUP160ENSG00000030066Homo sapiens
 Nup160ENSMUSG00000051329Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
Transport of Mature mRNA derived from an Intron-Containing Transcript
Regulation of Glucokinase by Glucokinase Regulatory Protein
snRNP Assembly
Separation of Sister Chromatids
Resolution of Sister Chromatid Cohesion
SUMOylation of DNA damage response and repair proteins
SUMOylation of ubiquitinylation proteins
Nuclear Pore Complex (NPC) Disassembly
SUMOylation of SUMOylation proteins
SUMOylation of chromatin organization proteins
SUMOylation of RNA binding proteins
Transcriptional regulation by small RNAs
RHO GTPases Activate Formins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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