ENSDARG00000027428


Danio rerio

Features
Gene ID: ENSDARG00000027428
  
Biological name :rpp30
  
Synonyms : ribonuclease P/MRP 30 subunit / rpp30
  
Possible biological names infered from orthology : O88796 / P78346 / ribonuclease P/MRP subunit p30
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 16446228
Gene end: 16452200
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000037308
NCBI entrez gene - 541352     See in Manteia.
RefSeq - NM_001013479
RefSeq Peptide - NP_001013497
swissprot - Q5BJK2
ZFIN ID - ZDB-GENE-050320-45
Ensembl - ENSDARG00000027428
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPP30ENSGALG00000006486Gallus gallus
 RPP30ENSG00000148688Homo sapiens
 Rpp30ENSMUSG00000024800Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002738  RNase P subunit p30
 IPR016195  Polymerase/histidinol phosphatase-like
 IPR018130  Ribosomal protein S2, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0008033 tRNA processing IBA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IBA
 cellular_componentGO:0005655 nucleolar ribonuclease P complex IBA
 cellular_componentGO:0005840 ribosome IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004526 ribonuclease P activity IBA
 molecular_functionGO:0004540 ribonuclease activity IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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