ENSDARG00000028559


Danio rerio

Features
Gene ID: ENSDARG00000028559
  
Biological name :march5l
  
Synonyms : march5l / membrane-associated ring finger (C3HC4) 5, like / Q6NYK8
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 42500895
Gene end: 42519773
  
Corresponding Affymetrix probe sets: Dr.7894.1.S1_at (Zebrafish Array)   NM_199739_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000037207
NCBI entrez gene - 326067     See in Manteia.
RefSeq - NM_199739
RefSeq Peptide - NP_956033
swissprot - Q6NYK8
ZFIN ID - ZDB-GENE-030131-4792
Ensembl - ENSDARG00000028559
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
march5 / membrane-associated ring finger (C3HC4) 5 / Q9NX47* / Q3KNM2* / E3 ubiquitin-protein ligase MARCH5 * / membrane associated ring-CH-type finger 5*ENSDARG0000003255265


Protein motifs (from Interpro)
Interpro ID Name
 IPR011016  Zinc finger, RING-CH-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0051865 protein autoubiquitination ISS
 biological_processGO:0090140 regulation of mitochondrial fission ISS
 biological_processGO:0090344 negative regulation of cell aging ISS
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005741 mitochondrial outer membrane ISS
 cellular_componentGO:0005783 endoplasmic reticulum ISS
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity ISS
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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