ENSDARG00000029043


Danio rerio

Features
Gene ID: ENSDARG00000029043
  
Biological name :nupl2
  
Synonyms : nucleoporin like 2 / nupl2 / Q6P0U9
  
Possible biological names infered from orthology : O15504
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 619200
Gene end: 627153
  
Corresponding Affymetrix probe sets: Dr.14413.1.A1_at (Zebrafish Array)   Dr.14413.2.S1_at (Zebrafish Array)   NM_213210_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000050124
NCBI entrez gene - 406491     See in Manteia.
RefSeq - NM_213210
RefSeq Peptide - NP_998375
swissprot - Q6P0U9
ZFIN ID - ZDB-GENE-040426-2292
Ensembl - ENSDARG00000029043
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000043896Gallus gallus
 NUPL2ENSGALG00000010942Gallus gallus
 NUPL2ENSG00000136243Homo sapiens
 Nupl2ENSMUSG00000048439Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006611 protein export from nucleus IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005643 nuclear pore IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 molecular_functionGO:0005049 nuclear export signal receptor activity IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Transport of Mature mRNA derived from an Intron-Containing Transcript
Regulation of Glucokinase by Glucokinase Regulatory Protein
snRNP Assembly
SUMOylation of DNA damage response and repair proteins
SUMOylation of ubiquitinylation proteins
Nuclear Pore Complex (NPC) Disassembly
SUMOylation of SUMOylation proteins
SUMOylation of chromatin organization proteins
SUMOylation of RNA binding proteins
Transcriptional regulation by small RNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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