ENSDARG00000029157


Danio rerio

Features
Gene ID: ENSDARG00000029157
  
Biological name :med23
  
Synonyms : med23 / mediator complex subunit 23 / Q5RIW8
  
Possible biological names infered from orthology : Q9ULK4
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 2499622
Gene end: 2584115
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119918
Ensembl peptide - ENSDARP00000116237
NCBI entrez gene - 445483     See in Manteia.
RefSeq - XM_005160335
RefSeq - XM_005160334
RefSeq - NM_001003990
RefSeq - XM_021468405
RefSeq Peptide - NP_001003990
swissprot - Q5RIW8
swissprot - B8A4G4
ZFIN ID - ZDB-GENE-040724-82
Ensembl - ENSDARG00000029157
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MED23ENSGALG00000040607Gallus gallus
 MED23ENSG00000112282Homo sapiens
 Med23ENSMUSG00000019984Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR021629  Mediator complex, subunit Med23


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0043473 pigmentation IMP
 biological_processGO:0050768 negative regulation of neurogenesis IMP
 biological_processGO:0072358 cardiovascular system development IMP
 cellular_componentGO:0005634 nucleus IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain increased amount , abnormal
brain decreased amount , abnormal
Show

 ZFA:0000010 cardiovascular system cardiovascular system hypertrophic , abnormal
Show

 ZFA:0000029 hindbrain hindbrain increased amount , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000075 spinal cord spinal cord increased amount , abnormal
Show

 ZFA:0000114 heart heart decreased functionality , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased length , abnormal
whole organism decreased amount , abnormal
whole organism viability , abnormal
whole organism dead , abnormal
whole organism decreased pigmentation , abnormal
whole organism Melanin decreased amount , abnormal
Show

 ZFA:0001117 post-vent region post-vent region curved ventral , abnormal
Show

 ZFA:0009091 melanocyte melanocyte decreased size , abnormal
melanocyte decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr