ENSDARG00000029905


Danio rerio

Features
Gene ID: ENSDARG00000029905
  
Biological name :phyhd1
  
Synonyms : phyhd1 / phytanoyl-CoA dioxygenase domain containing 1 / Q5U3U0
  
Possible biological names infered from orthology : Phytanoyl-CoA dioxygenase domain-containing protein 1 / Q5SRE7 / Q9DB26
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 4508959
Gene end: 4525080
  
Corresponding Affymetrix probe sets: Dr.19735.1.S1_at (Zebrafish Array)   NM_001007445_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000124422
Ensembl peptide - ENSDARP00000123099
Ensembl peptide - ENSDARP00000124739
Ensembl peptide - ENSDARP00000015072
NCBI entrez gene - 492804     See in Manteia.
RefSeq - NM_001007445
RefSeq Peptide - NP_001007446
swissprot - F8W2G4
swissprot - F8W3C5
swissprot - Q5U3U0
ZFIN ID - ZDB-GENE-041114-159
Ensembl - ENSDARG00000029905
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PHYHD1ENSGALG00000042266Gallus gallus
 PHYHD1ENSG00000175287Homo sapiens
 Phyhd1ENSMUSG00000079484Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008775  Phytanoyl-CoA dioxygenase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051213 dioxygenase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr