ENSDARG00000030588


Danio rerio

Features
Gene ID: ENSDARG00000030588
  
Biological name :slc10a1
  
Synonyms : slc10a1 / solute carrier family 10 (sodium/bile acid cotransporter), member 1
  
Possible biological names infered from orthology : O08705 / Q14973 / solute carrier family 10 member 1 / solute carrier family 10 (sodium/bile acid cotransporter family), member 1
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 28861435
Gene end: 28867748
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000145063
Ensembl peptide - ENSDARP00000047825
Ensembl peptide - ENSDARP00000113054
NCBI entrez gene - 562260     See in Manteia.
RefSeq - XM_685653
swissprot - Q5SPG0
ZFIN ID - ZDB-GENE-041001-190
Ensembl - ENSDARG00000030588
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q14973ENSG00000100652Homo sapiens
 O08705ENSMUSG00000021135Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc10a4 / solute carrier family 10, member 4 / Q96EP9* / Gm5868* / Q3UEZ8* / solute carrier family 10 (sodium/bile acid cotransporter family), member 4*ENSDARG0000000913134
slc10a2 / solute carrier family 10 (sodium/bile acid cotransporter), member 2 / P70172* / Q12908* / solute carrier family 10 member 2*ENSDARG0000001491629
slc10a3 / solute carrier family 10, member 3 / P09131* / P21129* / solute carrier family 10 (sodium/bile acid cotransporter family), member 3*ENSDARG0000010322022


Protein motifs (from Interpro)
Interpro ID Name
 IPR002657  Bile acid:sodium symporter/arsenical resistance protein Acr3
 IPR004710  Bile acid:sodium symporter
 IPR030208  Solute carrier family 10 member 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015721 bile acid and bile salt transport IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008508 bile acid:sodium symporter activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr