ENSDARG00000030830


Danio rerio

Features
Gene ID: ENSDARG00000030830
  
Biological name :cmtr1
  
Synonyms : cap methyltransferase 1 / cmtr1
  
Possible biological names infered from orthology : Cap-specific mRNA (nucleoside-2-O-)-methyltransferase 1 / Q8N1G2 / Q9DBC3
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 35361724
Gene end: 35396978
  
Corresponding Affymetrix probe sets: Dr.5090.1.S1_at (Zebrafish Array)   NM_200133_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000131572
Ensembl peptide - ENSDARP00000151962
Ensembl peptide - ENSDARP00000049372
Ensembl peptide - ENSDARP00000120932
NCBI entrez gene - 393102     See in Manteia.
RefSeq - NM_200133
RefSeq Peptide - NP_956427
swissprot - E9QI99
swissprot - F1R5C5
ZFIN ID - ZDB-GENE-040426-696
Ensembl - ENSDARG00000030830
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CMTR1ENSGALG00000010149Gallus gallus
 CMTR1ENSG00000137200Homo sapiens
 Cmtr1ENSMUSG00000024019Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cmtr2 / cap methyltransferase 2 / Q8BWQ4* / Q8IYT2* / Cap-specific mRNA (nucleoside-2-O-)-methyltransferase 2 *ENSDARG0000003634513


Protein motifs (from Interpro)
Interpro ID Name
 IPR000467  G-patch domain
 IPR001202  WW domain
 IPR002877  Ribosomal RNA methyltransferase FtsJ domain
 IPR025816  RrmJ-type ribose 2-O-methyltransferase domain
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase
 IPR030376  Cap-specific mRNA (nucleoside-2-O-)-methyltransferase 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006370 7-methylguanosine mRNA capping IEA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0080009 mRNA methylation IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004483 mRNA (nucleoside-2"-O-)-methyltransferase activity IEA
 molecular_functionGO:0008168 methyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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